CDS

Accession Number TCMCG057C45131
gbkey CDS
Protein Id XP_018450638.1
Location join(11820870..11822915,11823118..11823627,11823703..11823788,11823873..11824077)
Gene LOC108822116
GeneID 108822116
Organism Raphanus sativus

Protein

Length 948aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018595136.1
Definition PREDICTED: coatomer subunit beta-1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K17301        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006890        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030126        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030137        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0030663        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACAAATCTAGTACCTTGCTCGTACACTACGACAAAGGGACTCCAGCAGTTGCCAAGGAGATTAAAGAAGCTCTAGAAGGGAACGATGTGGAAGCAAAAGTTGATGCCATGAAGAAGGCGGTTATGCTTTTGCTGAACGGCGAAACCATTCCTCAGCTTTTCATAACTATTATTAGATACGTGCTGCCTTCCGAGGACCACACGATCCAAAAGCTTCTGCTGCTGTACCTGGAGCTGATTGAGAAAACAGATTCCAGAGGGAAGGTGCTGCCTGAGATGATTTTGATTTGCCAGAATCTTCGGAACAACCTTATGCATCCTAATGAGTACATTCGCGGAGTGACGCTGAGGTTTCTCTGCCGGTTGAAGGAGACTGAAATAGTGGAGCCTTTGACTCCATCAGTGTTGCAGAATCTGGAGCACCGCCATCCTTTTGTACGTAGGAATGCAATTCTGGCCGTCATGTCGATCTATAAGCTTCCACATGGTGAGCAGCTCTTCGTGGATGCACCTGAAATGATCGAGAAAGCTTTGTCAACAGAACAAGATCCGTCTGCCAAGAGAAATGCGTTTCTGATGCTTTTTACGTGTGCTGAGGAACGAGCTGTGAATTATCTTCTGAGCAATGTTGACAAGGTTTCAGACTGGAATGAGTCGCTTCAGATGGTGGTGCTGGAGCTGATTCGAAGTGTGTGTAAGACTAAACCATCGGAGAAGGGGAAATATATTAAGATTATTATTTCTCTGTTGAGTGCCACTTCCTCTGCAGTTATCTATGAATGTGCTGGGACGCTTGTTTCTCTCTCATCTGCCCCTACTGCTATTAGGGCTGCTGCCAACACCTACTGTCAACTTCTTCTTTCTCAGAGTGACAACAATGTGAAGCTCATTTTGCTCGATCGGTTGAGTGAGCTTAAGTCATCGCACAGAGATATCATGGTTGAGCTAATAATAGATGTGCTCAGAGTACTCTCAAGCCCGAACCTTGATATTCGCAGGAAGACACTTGACATTGCTCTTGATTTGATTACTCATCATAACATTAATGAGGTCGTTCAAGTGTTGAAGAAAGAAGTTGTGAAGACACAGAGTGGAGAGCTTGAGAAGAATGGAGAGTACAGACAAATGCTTATTCAAGCAATCCATGCCTGTGCAGTTAAGTTCCCCGAAGTTGCAAGCACCGTGGTCCATCTTCTAATGGATTTCTTGGGAGATAGCAATGTGGCTTCAGCACTTGACGTGATTTCATTTGTTAGAGAGATAATAGAAACAAATCCCAAGTTGAGAGTTTCAATCATAACCAGGTTGCTGGACACGTTCTATCAGATCCGCGCAGGAAAGGTCTGCCCTTGTGCACTGTGGATTATTGGGGAGTATTGCCTTTCACTTTCGGAAGTTGAGAGTGGCATTTCAACCATTAAGCAATGCCTTGGTGATTTACCATTCTACTCTGTCTCCGAAGAATCTGAGCCAACTGAGACTTCGAAGAAGATTCAGCCAACCTCTTCCGCTATGGTGTCCTCTAGAAAGCCTGTGATTCTTGCTGATGGTACTTATGCTACCCAAAGCGCGGCCTCTGAAACCACATTCTCAACACCAGCAGTTGTTCAGGGAGCATTGACTTCTGGAAATTTGAGAGCACTGCTTCTAACTGGCGATTTTTTCCTAGGATCAGTGGTTGCTTGCACGTTGACCAAACTTGTTCTCAGGTTGGAGGAGGTTCAGTCATCCAAAACTGAAGTGAACAAGACAGTCACACAGGCTTTGCTGATCATGGTTTCCATGTTGCAACTCGGGCAATCTCCTGCTTCCCCACACCCTATTGATAATGATTCTTATGAGAGGATTGTGTTGTGCATAAAATTGCTTTGCCATAGGAAAGATGAGATGAAAAAGATATGGTTGGAATCCTGCCGCCAGAGTTTTGTCAAGATGATTTCTGAAAAACAACTTAGAGAGATGGAGGAACTTAAGGCAAAGACCCAGACAACTCATGCTCAGCCTGATGATCTAATTGACTTCTTCCATCTAAAGAGCCGGAAGGGAATGAGTCAACTTGAGTTGGAAGACCAGGTACAAGATGACTTGAAGCGTGCTACTGGAGAGTTCACAAAGGACGAGAACGATGCGAACAAACTCAACCGTATTCTTCAACTCACAGGATTCAGTGATCCAGTCTATGCTGAAGCATATGTGACAGTCCATCACTACGACATCGCACTCGAGGTTACCGTTATCAACCGTACAAAGGAAACTCTTCAGAATCTGTGCTTGGAATTAGCAACCATGGGTGATCTCAAGCTTGTTGAGCGTCCTCAAAATTATAGCCTTGCACCTGCAACGAGCATGCAGATAAAAGCAAACATCAAGGTCTCGTCCACAGAGACCGGAGTCATATTCGGGAACATCGTCTATGAGACATCAAATGTTATGGAGCGAAACGTGGTGGTACTAAACGACATTCACATCGATATCATGGATTATATCTCCCCTGCTGTTTGCTCGGATGTTGCTTTCAGAACCATGTGGGCAGAGTTTGAATGGGAAAACAAGGTTGCTGTGAACACCAAGATTGAGAACGAAAGAGAGTTCCTCGACCACATTATCAAATCCACAAACATGAAGTGTCTCACTGGCCCATCTGAACTAGACGGAGAATGTGGGTTCCTTGCAGCAAACTTATACGCAAAAAGTGTGTTTGGTGAGGATGCTCTAGTGAATGTGAGTATCGAGAAGCAAACGGACGGAGCATTGAGTGGCTACATAAGGATAAGGAGCAAGACGCAAGGGATTGCGCTAAGTCTTGGAGACAAAATCACCCTCAAACAAAAGGGTAGCAACTGA
Protein:  
MDKSSTLLVHYDKGTPAVAKEIKEALEGNDVEAKVDAMKKAVMLLLNGETIPQLFITIIRYVLPSEDHTIQKLLLLYLELIEKTDSRGKVLPEMILICQNLRNNLMHPNEYIRGVTLRFLCRLKETEIVEPLTPSVLQNLEHRHPFVRRNAILAVMSIYKLPHGEQLFVDAPEMIEKALSTEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESLQMVVLELIRSVCKTKPSEKGKYIKIIISLLSATSSAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLILLDRLSELKSSHRDIMVELIIDVLRVLSSPNLDIRRKTLDIALDLITHHNINEVVQVLKKEVVKTQSGELEKNGEYRQMLIQAIHACAVKFPEVASTVVHLLMDFLGDSNVASALDVISFVREIIETNPKLRVSIITRLLDTFYQIRAGKVCPCALWIIGEYCLSLSEVESGISTIKQCLGDLPFYSVSEESEPTETSKKIQPTSSAMVSSRKPVILADGTYATQSAASETTFSTPAVVQGALTSGNLRALLLTGDFFLGSVVACTLTKLVLRLEEVQSSKTEVNKTVTQALLIMVSMLQLGQSPASPHPIDNDSYERIVLCIKLLCHRKDEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTHAQPDDLIDFFHLKSRKGMSQLELEDQVQDDLKRATGEFTKDENDANKLNRILQLTGFSDPVYAEAYVTVHHYDIALEVTVINRTKETLQNLCLELATMGDLKLVERPQNYSLAPATSMQIKANIKVSSTETGVIFGNIVYETSNVMERNVVVLNDIHIDIMDYISPAVCSDVAFRTMWAEFEWENKVAVNTKIENEREFLDHIIKSTNMKCLTGPSELDGECGFLAANLYAKSVFGEDALVNVSIEKQTDGALSGYIRIRSKTQGIALSLGDKITLKQKGSN